[Show all top banners]

babajee
Replies to this thread:

More by babajee
What people are reading
Subscribers
:: Subscribe
Back to: Kurakani General Refresh page to view new replies
 DNA Detection
[VIEWED 5552 TIMES]
SAVE! for ease of future access.
Posted on 03-31-06 12:07 PM     Reply [Subscribe]
Login in to Rate this Post:     0       ?    
 

Anyone any idea on DNA detection????
 
Posted on 03-31-06 12:38 PM     Reply [Subscribe]
Login in to Rate this Post:     0       ?    
 

PCR method.......
 
Posted on 03-31-06 12:38 PM     Reply [Subscribe]
Login in to Rate this Post:     0       ?    
 

yes...
what do u nee to kno?
 
Posted on 03-31-06 1:15 PM     Reply [Subscribe]
Login in to Rate this Post:     0       ?    
 

Got to design a complete process flow of DNA detection chip (lab-on-chip).
Starting from PCR to nano-wells to fluorescent tagging.

At this point, how to desing a lab-on-chip, inject solution into wells and detection of targeted DNA (micro-array, etc.)
 
Posted on 03-31-06 1:22 PM     Reply [Subscribe]
Login in to Rate this Post:     0       ?    
 

oh i love PCR......with those small microfuge tubes,

http://www.gene-chips.com/
 
Posted on 04-01-06 9:17 PM     Reply [Subscribe]
Login in to Rate this Post:     0       ?    
 
 
Posted on 04-02-06 9:47 AM     Reply [Subscribe]
Login in to Rate this Post:     0       ?    
 

1. Spectrophotometry:
The cheapest & easiest & simplest & quickest method is simply to measure OD (optical density) at 260nm and 280nm .
The ration of OD 260nm/280nm for pure DNA should be 1.8-2.0.

Spectrum of you sample might also give clue about the sample. DNA has a very charasteristic Absorption specturm.

2. Electrophoresis:
This is also another method where you run your DNA in Agarose Gel (0.75%-2% depending upon the size of your DNA, Bigger the DNA size less Agarose % you need) under the influence of Electric field (50-120V).

3.Physical Properties of DNA:
a. Melting Behaviour: If you always have the same DNA to detect, the melting behaviour of DNA might be also clue to detect DNA.
b. Viscousity: If you have genomic DNA and highly concentrated, & you are going to measure at constant condition. Then viscocity of the sample might help.

4. Protein DNA interaction: There are some proteins (enzymes) which are know to bind with DNA.

4. PCR:
This can be done only if you know the sequence of your DNA. For this you need to design primers, Enzyme polymerase, Neucleotides as reagents Besides you need also need thermocycler. This is possible only in research institute.

4.DNA sequencing:
This is also possible if you know the source or the sequence of your DNA. Possilble only in research institute.

I think for you purpose you simply need to measure OD at 260nm & 280nm and the ratio of them will tell you about rest.
 
Posted on 04-02-06 10:02 AM     Reply [Subscribe]
Login in to Rate this Post:     0       ?    
 

Gosh i totally forgot about electrophoresis for DNA using agarose and ethidium bromide ..i use polyacralymide gel for protein detection...
i don't have that much idea on microarrary. My freind used to do microarray for her research but i don't have that much idea..sorry..
 
Posted on 04-02-06 11:58 PM     Reply [Subscribe]
Login in to Rate this Post:     0       ?    
 

Thank you for helping me out.

I came through different methods of DNA detection during my search, and if you like to i don't have any problem sharing with you.
 
Posted on 04-03-06 12:03 AM     Reply [Subscribe]
Login in to Rate this Post:     0       ?    
 

Babajee can you share over here which method you came through ???
I have experience in some of the above methods..though i don't do my own research i do for my professor's research,,,are you a PHD student?
 
Posted on 04-03-06 12:51 AM     Reply [Subscribe]
Login in to Rate this Post:     0       ?    
 

I came with following sequential process flow: injection of target ssDNA followed by PCR (i did not wanted to do that cuz you can get away with it, but have to as my prof. wants to), microfluidics, micro-array, and fluorescent response.
This is what I have come up with and I am pretty sure it work. I need to talk to my group though.
No, I am not a PhD student.
 


Please Log in! to be able to reply! If you don't have a login, please register here.

YOU CAN ALSO



IN ORDER TO POST!




Within last 365 days
Recommended Popular Threads Controvertial Threads
शीर्षक जे पनि हुन सक्छ।
NRN card pros and cons?
TPS Re-registration case still pending ..
What are your first memories of when Nepal Television Began?
Anybody gotten the TPS EAD extension alert notice (i797) thing? online or via post?
TPS Re-registration
Democrats are so sure Trump will win
Basnet or Basnyat ??
TPS EAD auto extended to June 2025 or just TPS?
nrn citizenship
Toilet paper or water?
Sajha has turned into MAGATs nest
Nas and The Bokas: Coming to a Night Club near you
Mamta kafle bhatt is still missing
ढ्याउ गर्दा दसैँको खसी गनाउच
ChatSansar.com Naya Nepal Chat
whats wrong living with your parents ?
डीभी परेन भने खुसि हुनु होस् ! अमेरिकामाधेरै का श्रीमती अर्कैसँग पोइला गएका छन् !
3 most corrupt politicians in the world
अमेरिकामा बस्ने प्राय जस्तो नेपालीहरु सबै मध्यम बर्गीय अथवा माथि (higher than middle class)
Nas and The Bokas: Coming to a Night Club near you
Mr. Dipak Gyawali-ji Talk is Cheap. US sends $ 200 million to Nepal every year.
TPS Update : Jajarkot earthquake
NOTE: The opinions here represent the opinions of the individual posters, and not of Sajha.com. It is not possible for sajha.com to monitor all the postings, since sajha.com merely seeks to provide a cyber location for discussing ideas and concerns related to Nepal and the Nepalis. Please send an email to admin@sajha.com using a valid email address if you want any posting to be considered for deletion. Your request will be handled on a one to one basis. Sajha.com is a service please don't abuse it. - Thanks.

Sajha.com Privacy Policy

Like us in Facebook!

↑ Back to Top
free counters